Knowing the children need his help, Logan makes the fatal decision to use the serum left to him by Rictor to restore his healing factor which rapidly heals all his past scars and injuries but also has dangerous side effects once it wears off. Logan and Scott leave, and Logan tells Scott that Jean did make a choice – it was Scott.

After Logan arrives on the Island, he finds Stryker, who tells him about Deadpool, and reveals that Kayla (present on the island) wasn't really killed; as Silverfox is revealed to be alive and was reluctantly working for Stryker. Rogue looks at him, as Ororo continues her eulogy: "Charles was more than a leader, more than a teacher, he was a friend. Howlett went on a mission from Xavier to Arizona and the Weapon X base there, but found it deserted. The translucent veined look for Wolverine's bone claws were inspired by rattlesnake teeth. Xavier recalled Howlett, and Howlett and Summers went to Russia to deal with mobsters threatened Rasputin's family. Wolverine repeats Stryker's former words, saying he's just an animal with claws – if they die, he dies. Storm uses her wind powers to fly up to the sky, also preparing to battle. Just as Weapon XI is about to decapitate him, (at the command of Stryker), Victor shoves Weapon XI away, and both of them fall into the reactor. Knowing these are probably his last words, Charles Xavier smiles and tells Jean to not let it control her. She licks his ear before shifting a few more times to Jean, Rogue and Ororo, and he knocks her off him. In 1973, after sleeping with the woman he is supposed to be protecting, Wolverine's body is taken over by his future self's mind due to Shadowcat's powers in order to change the future. His is therefore less inclined to show mercy towards his opponents, anyone else that attacks him, or even those who simply anger him, such as when he tried to kill Noburo Mori since he was corrupt and part of Mariko's kidnapping to be paid a fortune. Jean telekinetically places the visor on Scott's eyes and says "Now! When he locks on a specific direction, he pops his claws and starts running, but is stopped a few feet later by two large spikes shot at his shoulders. Spike gets up and throws another spike at Wolverine, but Logan blocks it with his claws and starts running towards Spike, blocking more and more spikes on his way. He looks at the tube and sees a flash of himself running away from it naked and seeing his claws for the first time.

Wolverine holds his claws after being attacked for being a mutant. While Wolverine was unconscious, John nearly torches Bobby's house to the point where Rogue was forced to use her powers to stop him. Magneto drops to his knees, realizing he's now human, and then falls back.

However, just before offering him breakfast, Agent Zero kills the couple. The two fight the soldiers with great teamwork not knowing they are brothers still and are eventually brought down. Gray and Summers went to find a missing Rasputin, and Xavier's ex-wife Moira MacTaggert had the X-Men come to Muir Island as she and Xavier's son David Xavier had broken out. It's not the soldiers, though, but the mutants, and they enter. Howlett talked to them and ended up angering them even more, and blew their cover. He didn't get involved in Mystique's assassination of Bolivar Trask. The next morning, he attends the funeral of Yashida, where he saves Mariko from Yakuza assassins with the help of Kenuichio Harada. The soldier in the kitchen tries firing all over the place, but Bobby ducks in time. Logan goes to berserker rage and pops his claws in the soldier's chest, killing him in front of Bobby's eyes. Jean, in the back, realizes she has to do something, as she's their last hope. Hearing this, the Jean Grey part of her personality rises back for a moment, and she begs to him in tears to save her. Sabretooth joins them and removes Scott's visor, forcing him to close his eyes. sky turn dark and lightning strike, as the president sees the mutants standing in front of him, Storm's eyes glowing white. In the kitchen, Logan takes a bottle of beer from the fridge and, after sensing something near him, pops his claws; in front of the Drakes' cat. Before anyone can respond, a young man walks in. Colossus jumps down too, his metal form protecting him. Later that night, Logan is sleeping in his room, having a nightmare about when the adamantium was attached to his skeleton. He is completely ready to sacrifice his life if it will save someone he loves, and will stop at nothing to protect his friends and family. Logan answers him, and Jean kisses Scott goodbye, leaving towards the Hangar Bay. As Stryker tells Logan he has a job for him, Logan tells Stryker he already has a job. He hears the door open and retracts the claws, as Bobby's parents and brother enter and find him. Eventually, he manages to get to her and stand in front of her. He pops his claws, and then watches in shock as she pulls out adamantium claws of her own – five, one from each fingertip. He walks away, and she continues on her way out. Logan tries to slash him like he did with all other mutants, but it's no use, as the mutant quickly grows back his slashed arms every time and hits Wolverine when he's not ready. A wave of soldiers swarmed them, and Howlett slaughtered all of them before they found that the Savage Land's supercomputer was building its own biomechanical post-human race. Rogue spots Logan leaving and rushes to talk to him. In some cases, it is this brute-like side of Logan that make it easy for him kill and harm without hesitation.[12][1][9][8][13]. She wraps her legs around him as they continue to kiss, and scratches his arm painfully, knowing the wound will heal instantly. Jean wants to know more about Stryker, and Magneto says that he's a military scientist who spent his whole life trying to solve "the mutant problem", and says that Wolverine has a more intimate perspective, as his adamantium skeleton was created by Stryker. Before wheeling out, he asks Logan to watch over the kids that night, as he and Scott are going to visit an old friend. (Disney+ Original Series), Avengers Earth's Mightiest Heroes Season 3.

Gabriela helped several children escape from the Transigen compound before smuggling Laura across the border.

Logan walks away. Indeed, two small military jets are tailing them and order them to descend in 10 seconds. Just then, the jet lands in the yard and the mutants walk to it as none of the officers dares to hit them. Magneto and Phoenix, the only ones left on the hill, are looking around to find the rest of the X-Men, but the fog keeps them from it. In the back, the three kids sit in silent, scared – but ready. Magneto's army immediately charges forward at the X-Men. He finds Storm sitting on the ground, near Jean Grey's still alive body.

Logan looks confused, and the professor introduces himself as Charles Xavier and offers Logan breakfast. Logan starts running away, dodging the many spikes shot at him at dazzling speed.